===== Grid of models with TOUCAN ===== === Table 1. Computation of frequencies with RGraCo. === Distribution of the computation in different personal computers / servers. Status refers to R, F, and F, for Running, Finished (without errors), Finished (with errors); Error provides with track(s) were not computed or had problems; Digest (Yes/No) locally; Toucan enabled (Yes/No) == Computation DATE:(14/07/2017) == **Parameters File: datos_entrada.dat** ^ Freq_min|Freq_max|Lista_L|Level ^ 5|-99|c(0,1,2)|5 Not asigned ^ 4 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.05 | 2178|R | -|No | No| | | ^ 5 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.10 | 2178|R | -|No | No| | | ^ 6 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.15 | 2178|R | -|No | No| | | ^ 7 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.00 | 2178|R | -|No | No| | | ^ 8 |1.3-2.5 | [-0.09 - 0.09]| 1.8 | 0.05 | 2178|R | -|No | No| | | ^ 9 |1.3-2.5 | [-0.09 - 0.09]| 1.8 | 0.10 | 2178|R | -|No | No| | | ^ 10 |1.3-2.5 | [-0.09 - 0.09]| 1.8 | 0.15 | 2178|R | -|No | No| | | ^ 11 |1.3-2.5 | [-0.09 - 0.09]| 1.8 | 0.20 | 2178|R | -|No | No| | | ^DFE (IAA, 40 cpu, 10 threads/cpu)|||||||||||| ^VIP & PHI (IAA, 64 cpu) (26/07/2017)|||||||||||| ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan ^Start ^Finish| ^VIP data1|1.3-2.5 | [-0.09 - 0.09]| 1.6 | 0.05 | 2178 /2178|F | -|No | No| 9:57 17/07 | 11:00 25/07 | ^PHI data2|1.3-2.5 | [-0.09 - 0.09]| 1.6 | 0.10 | 100 /2177|R | -|No | No| 11:00 25/07 | | ^VIP data3|1.3-2.5 | [-0.09 - 0.09]| 1.6 | 0.20 | 300 /2180|R | -|No | No| 11:12 25/07| | == Computation DATE:(01/03/2017) == ^DFE (IAA, 40 cpu, 10 threads/cpu)|||||||||| ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan| ^DFE 1 |1.3-2.5 | +0.01 | 1.6 | 0.20 | 121|F | -|Yes | Yes| ^DFE 2 |1.3-2.5 | -0.01 | 1.6 | 0.20 | 121|F | -|Yes | Yes| ^DFE 3 |1.3-2.5 | 0.02 | 1.6 | 0.20 | 121|F| -|Yes | Yes| ^HYNODE (IAA, 24 cpu)|||||||||| ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan| ^HYN 1 |1.3-2.5 | -| - | - | 121|- | -|- | -| ^HYN 2 |1.3-2.5 | - | -| - | 121|- | -|- | -| ^IMAX (IAA, 40 cpu)|||||||||| ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan| ^IMA 1 |1.3-2.5 | -| - | - | 121|- | -|- | -| ^IMA 2 |1.3-2.5 | - | -| - | 121|- | -|- | -| ^PHI (IAA, 48 cpu)|||||||||| ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan| ^PHI 1 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.20 | 1694|R | -|- | -| ^VIP (IAA, 64 cpu)|||||||||| ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan| ^VIP 1 |1.3-2.5 | [-0.09 - 0.09]| 1.6 | 0.15 | 1694|F | -|Yes | Yes| ^VIP 2 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.00 | 1694|F | -|Yes | Yes| ^VIP 3 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.05 | 1694|F | -|Yes | -| ^VIP 4 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.10 | 1694|F | -|Yes | -| ^VIP 5 |1.3-2.5 | [-0.09 - 0.09]| 1.7 | 0.15 | 1694|R | -|- | -| ^MacPro (UGR, 8 cpu) |||||||||| ^JC 1 |1.3-2.5 | +0.06 | 1.6 | 0.0 | 121 |F |:!: 2.08| Yes | Yes | ^JC 2 |1.3-2.5 | +0.01 | 1.6 | 0.0 | 121 |F |-| Yes | Yes | ^JC 3.1 |1.3-2.5 | +0.02 | 1.6 | 0.0 | 121 |F | -|Yes | Yes | ^JC 3.2 |1.3-2.5 | +0.03 | 1.6 | 0.0 | 121 |F | -|Yes | Yes | ^JC 3.3 |1.3-2.5 | +0.04 | 1.6 | 0.0 | 121 |F | :!: 2.14, 2.15|Yes | Yes | ^JC 4.1 |1.3-2.5 | +0.05 | 1.6 | 0.0 | 121 |F |:!: 2.10-16|Yes | Yes | ^JC 4.2 |1.3-2.5 | +0.07 | 1.6 | 0.0 | 121 |F |:!: 2.08-17 |Yes| Yes | ^JC 4.3 |1.3-2.5 | +0.09 | 1.6 | 0.0 | 121 |F |:!: 2.07-11,2.14-18|Yes | Yes | ^JC 5.1 |1.3-2.5 | -0.01 | 1.6 | 0.0 | 121 |F |-|Yes | Yes | ^JC 5.2 |1.3-2.5 | -0.02 | 1.6 | 0.0 | 121 |F |- |Yes | Yes | ^JC 5.3 |1.3-2.5 | -0.03 | 1.6 | 0.0 | 121 |F | -|Yes | Yes | ^JC 5.4 |1.3-2.5 | -0.05 | 1.6 | 0.0 | 121 |F |-|Yes | Yes | ^JC 5.5 |1.3-2.5 | -0.06 | 1.6 | 0.0 | 121 |F |- |Yes | Yes | ^JC 5.6 |1.3-2.5 | -0.07 | 1.6 | 0.0 | 121 |F | -|Yes | Yes | ^JC 5.7 |1.3-2.5 | -0.08 | 1.6 | 0.0 | 121 |F |- |Yes | Yes | ^JC 5.8 |1.3-2.5 | -0.09 | 1.6 | 0.0 | 121 |F | -|Yes | Yes | ^JC 6.1 |1.3-2.5 | +0.08 | 1.6 | 0.0 | 121 |F |:!: 2.07-17 |Yes | Yes | ^JC 6.2 |1.3-2.5 | -0.04 | 1.6 | 0.0 | 121 |F | -|Yes | Yes | ---- ===== Analysis of Dnu-rho relation with MESA models including pre-MS ===== ^Bundle name ^Mass ^[Fe/H] ^alpha ^ovs_f ^ovs_f0 ^No tracks ^Status ^Error ^Digest ^Toucan ^inlist| ^af.pms-tams |[1.5, 3.0]| [-0.3,-0.1,0,0.1] | 0.01 :!: | 0.01 :!: | 0.21 | 121 |F | -| Yes | Yes | | ^af.pms-tams2 |[1.5, 3.0] | [-0.3] | 0.01 | 0.25 :!:| 0.05 | 121 |F | 1.65,1.70 | Yes | - | | ^af.pms-tams3 |[1.5, 3.0] | [-0.1] | 0.01 | 0.25 :!:| 0.05 | 121 |F | -| - | - | | ^af.pms-tams4 |[1.5, 3.0] | [0] | 0.01 | 0.25 :!:| 0.05 | 121 |F | -| - | - | | ^af.pms-tams5 |[1.5, 3.0] | [0.1] | 0.01 | 0.25 :!:| 0.05 | 121 |F | -| - | - | | :!: MLT convection is adopted, with options as to emulate CESAM configurations (drastic drop), so two new parameters are included in the "inlist" file. In our case, MESA(alpha) = 0.5 (see MESA website for explanation on overshoot parameters ). :!: af.pms-tams@iaa 2: El overshooting sea de tipo step y no exponencial ★ The number of mesh points ideally should be around 2,000 or more (at least for our comparison with CESAM results). We agreed to use ''mesh_delta_coeff = 0.15'' ^Bundle ^Mass ^[Fe/H] ^alpha ^ovs ^Tracks ^Stat ^Err ^Digest ^Toucan| ^DFE 2.1 |1.5-2.0 | -0.30 | 0.5| 0.01 | 10|F | 165,170 |Yes | -| ^DFE 2.2 |1.5-2.0 | -0.10 | 0.5| 0.01 | 10|F | 165 |Yes | -| ^DFE 2.3 |1.5-2.0 | 0.00 | 0.5| 0.01 | 10|F | 180 |Yes | -| ^DFE 2.4 |1.5-2.0 | 0.10 | 0.5| 0.01 | 10|F | 150 |Yes | -| ^DFE 2.5 |2.0-2.5 | -0.30 | 0.5| 0.01 | 10|F | - |Yes | -| ^DFE 2.6 |2.0-2.5 | -0.10 | 0.5| 0.01 | 10|F | - |Yes | -| ^DFE 2.7 |2.0-2.5 | 0.00 | 0.5| 0.01 | 10|F | - |Yes | -| ^DFE 2.8 |2.0-2.5 | 0.10 | 0.5| 0.01 | 10|F | - |Yes | -| ^DFE 2.9 |2.5-3.0| -0.30 | 0.5| 0.01 | 11|F | - |Yes | -| ^DFE 2.10 |2.5-3.0| -0.10 | 0.5| 0.01 | 11|F | - |Yes | -| ^DFE 2.11 |2.5-3.0| 0.00 | 0.5| 0.01 | 11|F | - |Yes | -| ^DFE 2.12 |2.5-3.0| 0.10 | 0.5| 0.01 | 11|F | - |Yes | -| ===== RGraCo installation ===== We will install RGraCo to compute adiabatic oscillation massively of the Pleiades data collection === Basic instructions === - Uncompress the .tar.gz file in the destination folder (leave the .tar.fz file), e.g.: /Destination/RGraCo/ - In terminal (check permission and use sudo when necessary) type: "R CMD build" and then "R CMD INSTALL --no-multiarch RGraCo_1.0.tar.gz === Known issues in MacOS === == Issue with the installation of "rJava" package (R) in MacOS (Sierra)== - Edit /opt/local/Library/Frameworks/R.framework/Resources/etc/Makeconf and change the line "LIBS = -llzma -lm -liconv -licuuc -licui18n" to "LIBS = -llzma -lm -liconv" - We have to install Java JDE (not only JRE) - Do "export JAVA_HOME=/System/Library/Java/JavaVirtualMachines/1.6.0.jdk/Contents/Home" - Execute in console (under sudo): R CMD javareconf - Do "sudo ln -s $(/usr/libexec/java_home)/jre/lib/server/libjvm.dylib /usr/local/lib" === Known issues in Linux === == Issue with the installation of "rJava" package (R) == When installing from R environment using "install.packages()" command gives the following error: ERROR: configuration failed for package ‘rJava’ You can try to install the package directly from the console using apt-get install r-cran-rjava ---- ======== Asteroseismology ======== ===== Analysis of Dnu-rho relation with MESA models including pre-MS ===== This research is part of the TFM's work by Jesús Uribe (VIU) to be delivered by April 2017. We will construct a grid of models (see table below) in order to reasonably reproduce Suárez et al. (2014) results regarding the relation between Dnu and mean density. Oscillations will be computed with RGraCo (adiabatic). The complete set of models will be uploaded to TOUCAN as a new DC with the name af.pms-tams@iaa. Details of the construction of the grid of models are updated in the [[proyectos:ugr-des-comp|computation page]]. ===== Analysis of delta Scuti stars in the Pleiades cluster ===== This work intends to study in detail some Pleiades stars observed with the Kepler satellite. In particular we will study the periodicities found in their oscillation spectrum and contrast with a large Data Collection of asteroseisimic models through the TOUCAN portal. Details of the construction of the grid of models are updated in the [[proyectos:ugr-des-comp|computation page]]. ====== Planetary Dynamics ====== ==== Paper Kepler 90 preparation ==== Tentative title "Study of dynamical stability of Kepler 90 planetary system with MEGNO parameter maps" Here we can write relevant information for discussion about the paper, including references, tables, figures, etc. that are useful to prepare the draft.